School of Anthropology & Conservation

Excellence in diversity Global in reach


 

 

Dr Jim Groombridge

Senior Lecturer in Biodiversity Conservation

Deputy Director of Postgraduate Studies: DICE Taught

 

profile image for Dr Jim Groombridge

My research interests lie primarily in population restoration, population ecology, conservation genetics and evolutionary studies involving phylogeny reconstruction. A central focus is the theoretical and practical aspects of endangered species conservation and the application of population, genetic, morphological and phylogenetic studies to enhance our understanding of the biological processes that guide the conservation trajectory of endangered species.

My background of conservation work on island species in the Indian Ocean (Mauritius and Seychelles) and the Pacific (Hawaiian islands) has combined the practice of field monitoring and population recovery techniques with the more theoretical approaches of evolutionary phylogenetics and conservation genetics at the population level.

My research group focuses on the evolution, population genetics and conservation of endangered populations, with a particular emphasis on endemic island species. Islands are justifiably celebrated as living laboratories for evolutionary studies as well as a focus for efforts to conserve their biodiversity. Valuable insights for conservation can be gained from studying island endemics in view of their history of isolation from ancestral mainland populations, together with the problems they can encounter from introduced species and diseases.

My work is supported by my research group who primarily work out of our Modern DNA and Museum DNA Lab.

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Recent Publications

Fabre, P-H., M. Irestedt, J. Fjeldså, R. Bristol, J. J. Groombridge, M. Irham & K. A. Jønsson (2012). Dynamic colonization exchanges between continents and islands drive diversification in paradise-flycatchers (Terpsiphone, Monarchidae). Journal of Biogeography, In Press.

Kundu, S., C. G. Faulkes, A. G. Greenwood, C. G. Jones, P. Kaiser, O. D. Lyne, S. A. Black, A. Chowrimootoo & J. J. Groombridge (2012). Tracking viral evolution during a disease outbreak: the rapid and complete selective sweep of a circovirus in the endangered echo parakeet. Journal of Virology doi: 10.1128/​JVI.06504-11.

Raisin, C., A. C. Frantz, S. Kundu, A. Greenwood, C. G. Jones, N. Zuel and Jim J. Groombridge (2012). Genetic consequences of intensive conservation management for the Mauritius parakeet. Conservation Genetics.doi: 10.1007/s10592-012-0319-0.

Paredes, U. M., R. Prys-Jones, M. Adams, J. J. Groombridge, S. Kundu, P. Agapow & R. L. Abel (2012). Micro-CT x-rays rays do not fragment DNA in preserved bird skins. Journal of Zoological Systematics and Evolutionary Research In Press.

Taylor, M. L., N. Bunbury,  L. Chong-Seng, N. Doak, S. Kundu, R. A. Griffiths and J. J. Groombridge (2012). Evidence for evolutionary distinctiveness of a newly discovered population of sooglossid frogs on Praslin Island, Seychelles. Conservation Genetics, DOI 10.1007/s10592-011-0307-9.

Kundu, S., Jones, C.G., Prys-Jones, R.P. and Groombridge, J.J. (2012). The Evolution of the Indian Ocean parrots (family: Psittaciformes): Extinction, eustacy and tectonism. Molecular Phylogenetics and Evolution. 62, 296-305

Pickles, R. S. A., J. J. Groombridge, V. D. Zambrana Rojas, P. Van Damme, D. Gottelli, C. V. Ariani, and W. C. Jordan (2011). Genetic diversity and population structure in the endangered giant otter, Pteronura brasiliensis. Conservation Genetics, DOI 10.1007/s10592-011-0279-9.

Black, S., Meredith, H. M. R. and Groombridge, J. J. (2011). Biodiversity Conservation: applying new criteria to assess excellence. Total Quality Management 22, 1–14.

Groombridge, J. J., C. Raisin, R. M. Bristol & D. S. Richardson (2011). Genetic consequences of reintroductions and insights from population history. In: Reintroduction biology: integrating science and management (Ewen, J.G., Armstrong, D.P., Parker, K.A. & Seddon, P.J. Editors). Wiley-Blackwell, Oxford, UK. ISBN 978-1-4051-8674-2.

 

More extensive list of selected publications

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BSc in Wildlife Conservation

DI508 - Skills for Conservation Biologists

DI521 - Species Conservation

DI503 - Evolutionary Genetics and Conservation

MSc in Conservation Biology

DI879 - Foundations in Natural Sciences for Conservation

DI836 - Conservation of Species

Island Species-Led Action (ISLA): I teach conservation genetics on this two week course, which has been run each year by the Durrell Wildlife Conservation Trust; Jersey (2004)St. Lucia (2005)Galapagos (2006)Mauritius (2007), Guam (2008)The 2009 course was held in Fiji. Further information is available here.

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My research group focuses on the evolution, population genetics and conservation of endangered populations. The groups’ current avian research focuses on endemic and endangered species of the Indian Ocean and Hawaiian islands, including a historical genetic study of the Seychelles kestrel, phylogenetic reconstruction of the extinct and surviving Psittacula parakeets, (Systematics Research Fund/Linnean Society of London Award), historical genetics of Hawaiian honeycreepers (NERC New Investigators Award), conservation genetics and restoration of Mauritius parakeets (Leverhulme award and two NERC CASE studentships), Seychelles paradise flycatchers (Darwin initiative award) and Maui Parrotbills (USFWS federal grant). I supervise a group of PhD students whose projects focus on these or related projects. The group has recently expanded its research emphasis on evolutionary genetics of historical populations and has subsequently set up a ‘Museum DNA Laboratory’ within DICE. This facility, isolated from the main laboratory, is dedicated to extraction and analysis of DNA from museum-aged (100-200-year-old) material, and hosts conservation genetic research projects that focus on a variety of endangered and extinct taxa.

 

Funding

2012

A cutting-EDGE approach to saving Seychelles’ evolutionarily distinct biodiversity. DEFRA Darwin Initiative.  PI: J. Groombridge.

£256,085

2011

From genes to environmental change: the spatial ecology of a tropical seabird; University of Reading. PI: Prof. K. Norris. 6/4/2011 to 5/3/2012.

£35,596

2011

Melanocortin receptor 1 (MC1R) genes: systematics and evolution of colour in parrots. University of Kent Faculty Small grant. 21/5/2011-20/5/2012.

£1,000

2011*

Impact of habitat loss on the genetic structure of a declining population of the Mauritius lowland day gecko: implications for conservation. NERC NBAF-S#540. PI: Prof. S. Harris, Co-I: J. Groombridge. 28/9/2009-27/9/2012.

£21,600

2011

Population genetics, inbreeding and disease in the red squirrel population on Jersey; JSPCA & States of Jersey. 1/4/2011-31/3/2012.

£13,370.

2011*

Do historical bottleneck effects out-weigh genetic consequences of reintroduction? – a test using Seychelles Paradise Flycatchers. NERC NBAF-S#559. 9/6/2011-8/6/2012.

£11,510

2011*

Invasive species and the ‘genetic rescue’ hypothesis: a test using the introduced UK population of rose-ringed parakeets. NERC NBAF-S#555. 14/4/2011-13/4/2012.

£9,203

2010*

From genes to environmental change: the spatial ecology of a tropical seabird; NERC NBAF-S#446. Molecular genotyping of satellite-tagged petrels. 6/4/2011 to 5/12/2011.

£20,703

2010

Conservation and reintroduction strategies for recovering the critically-endangered Maui Parrotbill (Pseudonestor xanthrophyrys). One of four named PIs on $907,153 US Fish and Wildlife Service SIDS grant; leading the conservation genetic component work package.

£10,265

2010*

Phenotypic plasticity and management of native white-clawed crayfish populations. NERC NBAF-S#428. 31/9/2009-30/11/2010.

£10,000

2010

Is non-neutral genetic diversity retained or lost by island bird populations following severe historical bottlenecks? University of Kent Faculty Small Grant. 1/6/2010-31/5/2011.

£540

2010

Population genetics of native populations of white-clawed crayfish in the UK to guide their conservation management using ARK sites. Environment Agency, UK.

£6,000

2009*

Characterisation of the genomic structure of the Major Histocompatibility Complex (MHC) and T-Cell Receptor (TCR) in the endangered Mauritius parakeet. NERC NBAF-Liverpool Advanced Genomics Facility#258. 1/10/2008-31/9/2009.

£8,000

2008

MHC diversity and emerging infectious disease in parrot populations on Mauritius. Leverhulme Trust research project grant. 28/4/2008-27/4/2011.

£216,000

2008*

The effects of inbreeding on immune function and interactions with disease in endangered Mauritius bird populations. NERC NBAF-S#366. 31/9/2009-30/11/2010.

£25,355

2008

Effects of inbreeding on individual levels of immunocompetence within bottlenecked bird populations that are exposed to introduced pathogens. NERC CASE PhD studentship. 1/10/2008-31/9/2011.

£72,117

2006

Investing in island biodiversity: restoring the Seychelles Paradise Flycatcher. DEFRA Darwin Initiative grant. 1/9/2006-31/8/2009.

£234,000

2006

Radiocarbon dating of feather samples from ancient ceremonial feather cloaks from the Hawaiian islands AHRC/NERC Oxford Radiocarbon Facility Award. 8/6/2006-7/6/2007.

£1,750

2005

Historical genetic profiles for extinct and surviving Hawaiian bird populations: genotyping feathers from 230-year-old ceremonial capes. NERC New Investigators Award. 1/3/2006-31/2/2007.

£51,725

2004

Searching for evidence of a historical population bottleneck in the Seychelles kestrel by using microsatellites to genotype 120-year-old pre-bottleneck museum specimens. Royal Society research grant. 6/3/2004-8/2/2006.

£14,600

2004

Phylogeographic patterns of island radiation: Psittacula parakeets of the Indian Ocean. Research grant from The Systematics Research Fund/Linnean Society of London. 1/3/2004-28/2/2005.

£1,200

2004

What island biota did Columbus see when he put ashore on the Virgin Islands in 1493? University of Kent Faculty Small Grant.

£900

 

 TOTAL FUNDING AWARDED:

 £1,021,519

 

 

* awards granting consumables/access to NERC Biomolecular Analysis Facility - Sheffield/Liverpool hubs

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Research Group

Rachel Bristol, DICE. Ecology, conservation genetics and restoration of the critically-endangered Seychelles Paradise Flycatcher, and a comparison of the evolutionary history of Indian Ocean flycatchers.

Claire Browne, DICE, Genetic variation of native white clawed crayfish (Austropotamobius pallipes) populations across south-east England.

Hazel Jackson, DICE. Population genetics of invasive species: characterising population genetic history and disease prevalence in the introduced population of ringneck parakeets (Psittacula krameri) in the UK.

Hanna Mounce, DICE. Recovery of the endangered Kiwikiu (Maui Parrotbill, Pseudonestor xanthophrys): population dynamics, conservation genetics and strategies for reintroduction.

Claire Raisin, DICE. Inbreeding, disease, and reproductive fitness in endemic and introduced populations of Psittacula parakeets on Mauritius. NERC Studentship. Collaboration with Mauritius Wildlife Foundation and Wildlife Vets International (CASE partner).

Siobhan Simpson - Molecular genetics and infectious disease in red squirrels on Jersey.

Simon Tollington, DICE, Inbreeding, immune function and disease in endemic and bird populations on Mauritius. NERC Studentship. Collaboration with Mauritius Wildlife Foundation and Wildlife Vets International (CASE partner)

 

Previous members of research group

Dr. Sarah Anderson, NERC-funded postdoctoral Research Associate

Dr Simon Black, DICE, MHC diversity and emerging infectious disease in parrot populations on Mauritius

Nina Cornish, DICE. Phylogeography and conservation of Jersey's Wall Lizards Podarcis muralis.

Steve Green, DICE. Ecology, conservation and commercial exploitation of the 'Hog Island' Boa constrictor in the Cayos Cochinos, Honduras (co-supervisor).

Nicola Jenner, DICE and Institute of Zoology. Factors affecting the social organisation of the black-backed jackal Canis mesomelas (co-supervisor).

Dr Samit Kundu, DICE, MHC diversity and emerging infectious disease in parrot populations on Mauritius

Rob Pickles, DICE and Institute of Zoology. Population genetics and social structure of the giant otter (Pteronura brasiliensis). NERC Studentship.

 

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PhD/Research students

Rachel Bristol, DICE. Ecology, conservation genetics and restoration of the critically-endangered Seychelles Paradise Flycatcher, and a comparison of the evolutionary history of Indian Ocean flycatchers.

Claire Browne, DICE, Genetic variation of native white clawed crayfish (Austropotamobius pallipes) populations across south-east England.

Hazel Jackson, DICE. Population genetics of invasive species: characterising population genetic history and disease prevalence in the introduced population of ringneck parakeets (Psittacula krameri) in the UK.

Hanna Mounce, DICE. Recovery of the endangered Kiwikiu (Maui Parrotbill, Pseudonestor xanthophrys): population dynamics, conservation genetics and strategies for reintroduction.

Siobhan Simpson, DICE, Molecular genetics and infectious disease in red squirrels on Jersey.

Simon Tollington, DICE, Inbreeding, immune function and disease in endemic and bird populations on Mauritius. NERC Studentship. Collaboration with Mauritius Wildlife Foundation and Wildlife Vets International (CASE partner)

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Editorial

Review board editor for the journal Endangered Species Research

Associate Editor for Conservation Genetics

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School of Anthropology and Conservation - © University of Kent

School of Anthropology and Conservation, Marlowe Building, The University of Kent, Canterbury, Kent, CT2 7NR, T: +44 (0)1227 827056

Last Updated: 23/03/2012